BOCTOPUS Friday, April 3 2026
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Beta barrel topology prediction
BOCTOPUS allows for requests of up to 1 protein sequence at a time for better predictive performance. If more than 1 protein sequences are input, only the first one is processed.
Enter up to 1 protein sequences in FASTA format


Alternatively, upload a text file containing up to 1 protein sequences in FASTA format


      

 
References
OCTOPUS:
OCTOPUS: improving topology prediction by two-track ANN-based preference scores and an extended topological grammar. Håkan Viklund and Arne Elofsson (2008) Bioinformatics 24(15), 1662-1668. [Pubmed]
BOCTOPUS:
BOCTOPUS: Improved topology prediction of transmembrane beta barrel proteins. Sikander Hayat and Arne Elofsson Bioinformatics (Accepted 2012) [Pubmed]
 
© 2011 Stockholm University, Stockholm Bioinformatics Centre, Center for Biomembrane Research