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© Arne Elofsson

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BOCTOPUS 2: Improved topology prediction of transmembrane beta-barrel proteins

Please paste your amino acid sequences in FASTA format (max 100000 chars)
Allowed characters: "ABCDEFGHIKLMNPQRSTUVWYZX*", of which "BUZ*" will be converted to 'X'
(Sequences should be no shorter than 10 amino acids, allow up to five input sequences)

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Reference

BOCTOPUS2:[Please cite this paper if you find BOCTOPUS2 useful in your research]
Inclusion of dyad-repeat pattern improves topology prediction of transmembrane β-barrel proteins. Sikander Hayat , Christoph Peters, Nanjiang Shu, Kostas D Tsirigos, Arne Elofsson. Bioinformatics, 2016 [PubMed]

Resource provider

BOCTOPUS2 is supported by the EGI FedCloud with the VO VO.NBIS.SE for computational resource.